Here is a much better article, which demonstrates the different quality of writing between various news agency (in this case, the Washington Post presents a much more clearly written and less biased article than FOX News).
https://www.washingtonpost.com/opinions/the-justice-departments-bank-settlement-slush-fund/2016/08/31/a3b4da7a-6eec-11e6-8365-b19e428a975e_story.html?utm_term=.011c473f3e69
Further, the DOJ doesn't tell these banks/companies who to donate money to. It's entirely up to them.
Second, the FOX article doesn't do a good job of explaining the scope of these donations. According to this article:
http://www.fed-soc.org/publications/detail/the-justice-departments-third-party-payment-practice-the-antideficiency-act-and-legal-ethics, the total amount distributed to "non-victim" groups, which was $7 billion. The FOX news article only mentions $30 million that went to "HUD Housing Counseling", and $412 million The Legal Services Corporation. Those amounts pale in comparison tot he total value.
Third, neither the HUD nor the LSC are "far left" groups, as you state.
Finally, this isn't an OBAMA issue; this isn't a Democratic Party issue; it's not even Federal government issue. This practice has existed for years, and exists at all levels of law and government, including amongst law-suits between individuals.
I actually agree that practice either needs to be curbed or stopped out-right, as it circumvents the federal appropriations process, which is a key component of the division of powers between the executive and legislature, serving as a check on the President's powers.
However, the FOX news articles make it sound like this is some Obama era conspiracy, which it's not.